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Gentleman Lab Members

Robert Gentleman, PhD
Kyriacos Markianos, PhD
Zhen Jiang, PhD
Nolwenn Le Meur, PhD
Brigham Mecham
Tony Chiang
Nianhua Li
Martin Morgan
Herve Pages

bioinformatics

PerturbationAnalyzer: A tool for investigating the effects of concentration perturbation on protein interaction networks.

PyNAST: A flexible tool for aligning sequences to a template alignment.

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.

Automatic clustering of docking poses in virtual screening process using self-organising map.

Identification of substrates for Ser/Thr kinases using residue based statistical pair potentials.

Target prediction and a statistical sampling algorithm for RNA-RNA interaction.

Co-expression Networks: Graph Properties and Topological Comparisons.

Quantifying Uncertainty in Genotype Calls.

hPDI: a database of experimental human protein-DNA interactions.

Rapid model quality assessment for protein structure predictions using the comparison of multiple models without structural alignments.

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